RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for A4GALT (Homo sapiens)

Ensembl gene IDs: ENSG00000128274

Ensembl transcript IDs: ENST00000249005.3, ENST00000381278.4, ENST00000401850.5, ENST00000465765.2, ENST00000483026.2, ENST00000642412.2

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCACAGCCTCCCACTGGGCCTGCTCCCACAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTC +
Preference number: 1 (lower is better)
Translates to: STASHWACSHSSSTA*LSPVAARASLSRAL
Trigger: GAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR GCA 90 bp GGGCACCTCTGTCCCAACTGCCTGGCTTTCCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGG +
Preference number: 1 (lower is better)
Translates to: GHLCPNCLAFRTTWG*PEVHPSCLLSRRPG
Trigger: CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 90 bp TGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCG +
Preference number: 1 (lower is better)
Translates to: CLEGPGHSLSALRWL*HHVSALPRDRTLSS
Trigger: CGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 90 bp GCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTG +
Preference number: 1 (lower is better)
Translates to: ACCLEGPGHSLSALR*LWHHVSALPRDRTL
Trigger: CAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 90 bp CCTCGTGGGCACCTCTGTCCCAACTGCCTGGCTTTCCGCACCACCTaGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGG +
Preference number: 1 (lower is better)
Translates to: PRGHLCPNCLAFRTT*GCPEVHPSCLLSRR
Trigger: CCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTGCCCACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: ALTERPPLAMAPCVSPASPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGGAAGGGCGGCCCAGTaGCCCATCAGGAGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: GHSLSALRWLWHHVSALPGRAAQ*PIRSRL
Trigger: CAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGGAAGGGCGGCCCAGTaGCCCATCAGGAGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ALTERPPLAMAPCVSPASGRAAQ*PIRSRL
Trigger: CAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CAA 90 bp TTCCGCACCACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTaGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: FRTTWGCPEVHPSCL*SRRPGALTERPPLA
Trigger: AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: ALTERPPLAMAPCVSPASSSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: SCLLSRRPGALTERPPLASSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGTCCACAGCCTCCCACTaGGCCTGCTCCCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGSTASH*ACSHSS
Trigger: GGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGALRWL*HHVSAL
Trigger: CAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPSAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR TCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGCCCGGGGCACTCACTaGGCGCCCTCCGCTGGCTAT +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPARGTH*APSAGY
Trigger: ATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVSSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSSAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPRTTWG*PEVHPS
Trigger: GGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCG...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPALRWL*HHVSAL
Trigger: CAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCCTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCA +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPLSALR*LWHHVS
Trigger: TGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAG...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCTCTGTCCCAACTGCCTaGCTTTCCGCACCACCTGGG +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPSVPTA*LSAPPG
Trigger: CCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGA...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTCCACAGCCTCCCACTaGGCCTGCTCCCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSSTASH*ACSHSS
Trigger: GGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCACCATGTGTCAGCCCTaGCTCGAGACAGGACACTGT +
Preference number: 2 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPTMCQP*LETGHC
Trigger: ACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR GCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCACCATGTGTCAGCCCTaGCTCGAGACAGGACACTGT +
Preference number: 2 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSTMCQP*LETGHC
Trigger: ACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGT...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CAA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGG +
Preference number: 3 (lower is better)
Translates to: SCLLSRRPGALTERPPLAPGPSI*PPREGR
Trigger: CCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGG...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 72 bp GGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTGCCTCGAGACAGGACA +
Preference number: 3 (lower is better)
Translates to: GPGHSLSALRWL*HHVSALPRDRT
Trigger: TGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR GCA 72 bp GCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTaGCTCGAGACAGGACACTGTCCTCGGGGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: APSAGYGTMCQP*LETGHCPRGVH
Trigger: GTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 72 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCAGCCCTGCCTCGAGAC +
Preference number: 3 (lower is better)
Translates to: LEGPGHSLSALR*LWHHVSALPRD
Trigger: GTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CCA 72 bp CACCTCTGTCCCAACTGCCTGGCTTTCCGCACCACCTaGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: HLCPNCLAFRTT*GCPEVHPSCLL
Trigger: CAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR-3UTR CAA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGG +
Preference number: 3 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSPGPSI*PPREGR
Trigger: CCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGG...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR GCA 72 bp TGTCCCAACTGCCTGGCTTTCCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGA +
Preference number: 3 (lower is better)
Translates to: CPNCLAFRTTWG*PEVHPSCLLSR
Trigger: TCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPISAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGAGGGTGCAGACCCGCTaGCTTGGGGCGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPRVQTR*LGAPRS
Trigger: GCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCACCCT...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAACCGGACCCTTGGGGCTaGGTCTCCCCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQPDPWG*VSPSPA
Trigger: GGCAGGGCTGGGGGAGACCCAGCCCCAAGGGTCCGG...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
3UTR CAA 72 bp TGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: WQLGPPSPGPSI*PPREGRPSAPS
Trigger: TGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCAGCGCCATGAACTCGTaGCGGCGCTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCSAMNS*RRSKAR
Trigger: CCTGGCCTTCGAGCGCCGGCACGAGTTCATGGCGCT...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCGAGAGGTGGGGATCCTaGCAGCCCACAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIERWGS*QPTGLR
Trigger: CCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTC...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCGCAGTGCCCTGGACGTaGCCTCGAACCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIAVPWT*PRTACP
Trigger: AGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGC...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCCGGACCCTTGGGGCTaGGTCTCCCCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGPDPWG*VSPSPA
Trigger: GGCAGGGCTGGGGGAGACCCAGCCCCAAGGGTCCGG...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAAGCTGCGGGCCCTGGTaGCCCCAGATCCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQSCGPW*PQIQPL
Trigger: CAACGGCTGGATCTGGGGTCACCAGGGCCCGCAGCT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGCCTGGGCAGCCCATTaGAGAGAGGTGGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCAWAAH*REVGIL
Trigger: CAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR GCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCGAERR*HPEALS
Trigger: TGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCGGAAGGGCGGCCCAGTaGCCCATCAGGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIGRAAQ*PIRSRL
Trigger: CAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCC...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCCCAGCAGGAACCGGCTaGTCAGCCTGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIPAGTG*SAWAAH
Trigger: ATGGGCTGCCCAGGCTGACCAGCCGGTTCCTGCTGG...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGATGTTGCCTGGAGTaGGGCCGTGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIRCCLE*GRGRVG
Trigger: CCCCACCCTCCCACGGCCCCACTCCAGGCAACATCT...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGTTGGGGAGGTGACCTaGCGGGCCCCTCACAAGTAC +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCVGEVT*RAPHKY
Trigger: GTACTTGTGAGGGGCCCGCCAGGTCACCTCCCCAAC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCALRWL*HHVSAL
Trigger: CAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGCCGGACCCTTGGGGCTaGGTCTCCCCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVPDPWG*VSPSPA
Trigger: GGCAGGGCTGGGGGAGACCCAGCCCCAAGGGTCCGG...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWSAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPTWDSG*VLAADS
Trigger: GGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGT...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQTWDSG*VLAADS
Trigger: GGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCGCCGAACTTCCACATaGGTGCGATCCTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCRRTST*VRSWRR
Trigger: ACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCG...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCAGCATAGGTGGCACTaGGCAGCCGCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPQHRWH*AAAAAP
Trigger: AGGAGCTGCCGCGGCTGCTCAGTGCCACCTATGCTG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCCCGGGGCACTCACTaGGCGCCCTCCGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWARGTH*APSAGY
Trigger: ATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGC...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCCACCTGGGGGTGCCCTaGGGTTCATCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIHLGVP*GSSFLP
Trigger: AGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTG...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGTGAGATGCCCAGGTaGCGGGGCAGAGAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPISEMPR*RGREAL
Trigger: CAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACT...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCWPRTA*PGSSCS
Trigger: GGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCA...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCCGGGCCCTCAATCTTaGCTCCCCGGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPPGPQS*LPGKGG
Trigger: GCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGG...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCCGGGAGACACGCCCTaGCTCAGCAGCCGACCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPPGDTP*LSSRPS
Trigger: AGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCCAGCAGGAACCGGCTaGTCAGCCTGGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPPAGTG*SAWAAH
Trigger: ATGGGCTGCCCAGGCTGACCAGCCGGTTCCTGCTGG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGAGATGTTGCCTGGAGTaGGGCCGTGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPRCCLE*GRGRVG
Trigger: CCCCACCCTCCCACGGCCCCACTCCAGGCAACATCT...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGAAGAAGATGTTGCCTaGAGTGGGGCCGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCEEDVA*SGAVGG
Trigger: CCCTCCCACGGCCCCACTCCAGGCAACATCTTCTTC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGGGTGCCCAGCACGTTaGTCAGGTTCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCGCPAR*SGSAGS
Trigger: AGAACCTGCGGAACCTGACCAACGTGCTGGGCACCC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGGGCCAGCAGTGCCCTaGACGTGGCCTCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPGPAVP*TWPRTA
Trigger: CGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTGGGCCAGCAGTGCCCTaGACGTGGCCTCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: SCLLSRRPGALTERPPLAGPAVP*TWPRTA
Trigger: CGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCC...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCGTTGGGGAGGTGACCTaGCGGGCCCCTCACAAGTAC +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIVGEVT*RAPHKY
Trigger: GTACTTGTGAGGGGCCCGCCAGGTCACCTCCCCAAC...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGTCCACAGCCTCCCACTaGGCCTGCTCCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPSTASH*ACSHSS
Trigger: GGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCLSALR*LWHHVS
Trigger: TGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAG...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCTCTGTCCCAACTGCCTaGCTTTCCGCACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCSVPTA*LSAPPG
Trigger: CCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGA...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPEAAQK*DAQVPG
Trigger: CCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTC...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCCAGGAACGCGCCGTTaGGGACGTAGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWPGTRR*GRSGTG
Trigger: CCCAGTCCCGCTACGTCCTCAACGGCGCGTTCCTGG...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGAGCAGGTTGGGGAGGTaGCCTGGCGGGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWSRLGR*PGGPLT
Trigger: TGTGAGGGGCCCGCCAGGTCACCTCCCCAACCTGCT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGAGCAGGTTGGGGAGGTaGCCTGGCGGGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWSRLGR*PGGPLT
Trigger: TGTGAGGGGCCCGCCAGGTCACCTCCCCAACCTGCT...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGCAGGTTGGGGAGGTaGCCTGGCGGGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASSRLGR*PGGPLT
Trigger: TGTGAGGGGCCCGCCAGGTCACCTCCCCAACCTGCT...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGGGTGCAGACCCGCTaGCTTGGGGCGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGRVQTR*LGAPRS
Trigger: GCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCACCCT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPISSEVR*PGAGAE
Trigger: CTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCT...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCGTAGCGGGACTGGGTaGCCAGCACGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPRSGTG*PARWSG
Trigger: ACCTGACCAACGTGCTGGGCACCCAGTCCCGCTACG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPISSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAACGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQRTTWG*PEVHPS
Trigger: GGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCG...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCTCCAGCGGGAGCATCTaGACATTCGGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCSSGSI*TFGKQL
Trigger: GAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGA...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGCAGTGCCCTGGACGTaGCCTCGAACCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPAVPWT*PRTACP
Trigger: AGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAGGGCCAGCAGTGCCCTaGACGTGGCCTCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPGPAVP*TWPRTA
Trigger: CGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCC...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGTTGGGGAGGTGACCTaGCGGGCCCCTCACAAGTAC +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPVGEVT*RAPHKY
Trigger: GTACTTGTGAGGGGCCCGCCAGGTCACCTCCCCAAC...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQALRWL*HHVSAL
Trigger: CAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGC...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGTCCGCCCCGGACCCTTaGGGCTGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGSAPDP*GWVSPS
Trigger: GCTGGGGGAGACCCAGCCCCAAGGGTCCGGGGCGGA...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPTWDSG*VLAADS
Trigger: GGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGT...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGCATGCACAGCGCCATaGACTCGTGCCGGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASACTAP*TRAGAR
Trigger: TCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGGCATGCACAGCGCCATaGACTCGTGCCGGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWACTAP*TRAGAR
Trigger: TCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGC...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAAGCTGCGGGCCCTGGTaGCCCCAGATCCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPSCGPW*PQIQPL
Trigger: CAACGGCTGGATCTGGGGTCACCAGGGCCCGCAGCT...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCAGCATAGGTGGCACTaGGCAGCCGCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASQHRWH*AAAAAP
Trigger: AGGAGCTGCCGCGGCTGCTCAGTGCCACCTATGCTG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCCCGGGGCACTCACTaGGCGCCCTCCGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGARGTH*APSAGY
Trigger: ATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCCAGGAAGAAGATGTTaGCTGGAGTGGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPPGRRC*LEWGRG
Trigger: CCCACGGCCCCACTCCAGGCAACATCTTCTTCCTGG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGAGCGCCATGAACTCGTaGCGGCGCTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWSAMNS*RRSKAR
Trigger: CCTGGCCTTCGAGCGCCGGCACGAGTTCATGGCGCT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAGGCTCTCGGCCAGGCTaGGGATGGAACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQGSRPG*GWNTTS
Trigger: AGAAGTGGTGTTCCATCCGCAGCCTGGCCGAGAGCC...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGGGAAGGGCGGCCCAGTaGCCCATCAGGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVGRAAQ*PIRSRL
Trigger: CAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCC...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQSSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAACACCTCTGTCCCAACTaGCTGGCTTTCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQHLCPN*LAFRTT
Trigger: GGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTG...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGTCTCCCCCAGCCCTaGCACTTTCCTACCAACAGC +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPGLPQP*HFPTNS
Trigger: GCTGTTGGTAGGAAAGTGGCAGGGCTGGGGGAGACC...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAAGGAACATGCCCAGGTaGCTCGCAGGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQRNMPR*LAGGWR
Trigger: CCTCCAACCACCTGCGAGGCACCTGGGCATGTTCCT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCCCATTGCAGAGAGGTaGGGATCCTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPPIAER*GSWQPT
Trigger: TGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCTCGAACCGCGTGCCCTaGCTCTTCTTGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPISNRVP*LFLFHT
Trigger: CGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGA...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGTGGCCTCGTGCGTCGTaGGGCAGTAGCGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWWPRAS*GSSGHA
Trigger: TGCATGCCCGCTACTGCCCCACGACGCACGAGGCCA...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTTGGCCTCGTGCGTCGTaGGGCAGTAGCGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SCLLSRRPGALTERPPLAWPRAS*GSSGHA
Trigger: TGCATGCCCGCTACTGCCCCACGACGCACGAGGCCA...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGTCCACAGCCTCCCACTaGGCCTGCTCCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWSTASH*ACSHSS
Trigger: GGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCCCAGGAACGCGCCGTTaGGGACGTAGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSPGTRR*GRSGTG
Trigger: CCCAGTCCCGCTACGTCCTCAACGGCGCGTTCCTGG...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGCCAGGAACGCGCCGTTaGGGACGTAGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQPGTRR*GRSGTG
Trigger: CCCAGTCCCGCTACGTCCTCAACGGCGCGTTCCTGG...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGCCAGGAACGCGCCGTTaGGGACGTAGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGPGTRR*GRSGTG
Trigger: CCCAGTCCCGCTACGTCCTCAACGGCGCGTTCCTGG...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAGCATGCACAGCGCCATaGACTCGTGCCGGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPACTAP*TRAGAR
Trigger: TCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGC...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGCTGCGGGCCCTGGTaGCCCCAGATCCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSCGPW*PQIQPL
Trigger: CAACGGCTGGATCTGGGGTCACCAGGGCCCGCAGCT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCGCAGCTCCTCGGGGTTaGTGTCCTCAAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCAAPRG*CPQSTS
Trigger: AGAAGTACTTTGAGGACATCAACCCCGAGGAGCTGC...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCACAGCATAGGTGGCACTaGGCAGCCGCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPQHRWH*AAAAAP
Trigger: AGGAGCTGCCGCGGCTGCTCAGTGCCACCTATGCTG...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGAGCAGGTTGGGGAGGTaGCCTGGCGGGCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGSRLGR*PGGPLT
Trigger: TGTGAGGGGCCCGCCAGGTCACCTCCCCAACCTGCT...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGCCCGGGGCACTCACTaGGCGCCCTCCGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVARGTH*APSAGY
Trigger: ATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCACCTGGGGGTGCCCTaGGGTTCATCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASHLGVP*GSSFLP
Trigger: AGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCCTGGGCAGCCCATTaGAGAGAGGTGGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWAWAAH*REVGIL
Trigger: CAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGC...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR GCA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCCAGGAAGAAGATGTTaGCTGGAGTGGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGPGRRC*LEWGRG
Trigger: CCCACGGCCCCACTCCAGGCAACATCTTCTTCCTGG...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCLLSRRPGALTERPPLAGAERR*HPEALS
Trigger: TGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCC...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGTGAGATGCCCAGGTaGCGGGGCAGAGAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASSEMPR*RGREAL
Trigger: CAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACT...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGAGTGAGATGCCCAGGTaGCGGGGCAGAGAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVSEMPR*RGREAL
Trigger: CAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACT...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: LSRALNLASPGRAAQCPIELPHE*DPGGVG
Trigger: TCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTC...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGCGTAGCGGGACTGGGTaGCCAGCACGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVRSGTG*PARWSG
Trigger: ACCTGACCAACGTGCTGGGCACCCAGTCCCGCTACG...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCGTAGCGGGACTGGGTaGCCAGCACGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASRSGTG*PARWSG
Trigger: ACCTGACCAACGTGCTGGGCACCCAGTCCCGCTACG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWRTTWG*PEVHPS
Trigger: GGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCG...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGAGAGGTGGGGATCCTaGCAGCCCACAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGERWGS*QPTGLR
Trigger: CCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGACCGGCTGGTCAGCCTaGGCAGCCCATTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASTGWSA*AAHCRE
Trigger: CTCTCTGCAATGGGCTGCCCAGGCTGACCAGCCGGT...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGATTCGGGGTGAGTTCTaGCGGCCGACTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWIRGEF*RPTPPS
Trigger: GCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAAT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGATTCGGGGTGAGTTCTaGCGGCCGACTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVIRGEF*RPTPPS
Trigger: GCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAAT...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCACAAGTACATTTTCATaGCCTCGTGCGTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASLSRALNLASPGRAAQCTSTFS*PRASWG
Trigger: GCCCCACGACGCACGAGGCCATGAAAATGTACTTGT...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGGCCCTCCGCTGGCTATaGCACCATGTGTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWALRWL*HHVSAL
Trigger: CAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGC...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGGCTTTCCGCACCACCTaGGGGTGCCCTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGAFRTT*GCPEVH
Trigger: ATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGC...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQTWDSG*VLAADS
Trigger: GGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGT...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCCGAACTTCCACATaGGTGCGATCCTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPRRTST*VRSWRR
Trigger: ACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCG...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGCATGCACAGCGCCATaGACTCGTGCCGGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGACTAP*TRAGAR
Trigger: TCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCAGCTGCGGGCCCTGGTaGCCCCAGATCCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVSCGPW*PQIQPL
Trigger: CAACGGCTGGATCTGGGGTCACCAGGGCCCGCAGCT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGCAGCATAGGTGGCACTaGGCAGCCGCGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQQHRWH*AAAAAP
Trigger: AGGAGCTGCCGCGGCTGCTCAGTGCCACCTATGCTG...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCCAGGAAGAAGATGTTaGCTGGAGTGGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPPGRRC*LEWGRG
Trigger: CCCACGGCCCCACTCCAGGCAACATCTTCTTCCTGG...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVSSEVR*PGAGAE
Trigger: CTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCT...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTGGCTCTCGGCCAGGCTaGGGATGGAACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SCLLSRRPGALTERPPLAGSRPG*GWNTTS
Trigger: AGAAGTGGTGTTCCATCCGCAGCCTGGCCGAGAGCC...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGGGCTCTCGGCCAGGCTaGGGATGGAACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVGSRPG*GWNTTS
Trigger: AGAAGTGGTGTTCCATCCGCAGCCTGGCCGAGAGCC...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWWPRTA*PGSSCS
Trigger: GGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCA...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGGAAGGGCGGCCCAGTaGCCCATCAGGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGGRAAQ*PIRSRL
Trigger: CAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGACCATGTGTCAGCCCTaGCTCGAGACAGGACACTGT +
Preference number: 4 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPTMCQP*LETGHC
Trigger: ACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGT...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCACCTCTGTCCCAACTaGCTGGCTTTCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASHLCPN*LAFRTT
Trigger: GGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGGTCTCCCCCAGCCCTaGCACTTTCCTACCAACAGC +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPGLPQP*HFPTNS
Trigger: GCTGTTGGTAGGAAAGTGGCAGGGCTGGGGGAGACC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGGCACTTCTGGGCCTCTaGCCCACTCAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWALLGL*PTQSLL
Trigger: CAACAGGGACTGAGTGGGGCAGAGGCCCAGAAGTGC...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGCACTTCTGGGCCTCTaGCCCACTCAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPALLGL*PTQSLL
Trigger: CAACAGGGACTGAGTGGGGCAGAGGCCCAGAAGTGC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCACTTCTGGGCCTCTaGCCCACTCAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWALLGL*PTQSLL
Trigger: CAACAGGGACTGAGTGGGGCAGAGGCCCAGAAGTGC...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGGTGGCCAGGAACATaGCCAGGTGCCTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPWWPGT*PGASQV
Trigger: CACCTGCGAGGCACCTGGGCATGTTCCTGGCCACCA...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGCCGGGAGACACGCCCTaGCTCAGCAGCCGACCTTCT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGPGDTP*LSSRPS
Trigger: AGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGG...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGAAGAAGATGTTGCCTaGAGTGGGGCCGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASEEDVA*SGAVGG
Trigger: CCCTCCCACGGCCCCACTCCAGGCAACATCTTCTTC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGGGTGCCCAGCACGTTaGTCAGGTTCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPGCPAR*SGSAGS
Trigger: AGAACCTGCGGAACCTGACCAACGTGCTGGGCACCC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAAGTCCTGCCAGGGGATaGGGTAGAAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPSPARG*GRRPQG
Trigger: CCCCTGAGGCCTTCTACCCCATCCCCTGGCAGGACT...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGTCCACAGCCTCCCACTaGGCCTGCTCCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSTASH*ACSHSS
Trigger: GGAGCTGTGGGAGCAGGCCCAGTGGGAGGCTGTGGA...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGCTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWLSALR*LWHHVS
Trigger: TGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAG...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGTCTGTCCCAACTGCCTaGCTTTCCGCACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASSVPTA*LSAPPG
Trigger: CCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGA...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTTCTGTCCCAACTGCCTaGCTTTCCGCACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPSVPTA*LSAPPG
Trigger: CCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGA...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGAACCACCCTATGGGGTaGCAATCACCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWNHPMG*QSPPPP
Trigger: GGGTGGGGGTGGTGATTGCCACCCCATAGGGTGGTT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAACTTGGACCCTGCTCCTaGGGAAAAGACTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQLGPCS*GKDCGN
Trigger: GTTCCCACAGTCTTTTCCCCAGGAGCAGGGTCCAAG...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGAGGAGCAGCAGGCTTaGACCCTGCTCCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASEEQQA*TLLLGK
Trigger: TTTCCCCAGGAGCAGGGTCCAAGCCTGCTGCTCCTC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
3UTR CAA 72 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTaGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCL*SRRPGALTERP
Trigger: AGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSEAAQK*DAQVPG
Trigger: CCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTC...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGCACCTGGGGGTGCCCTaGGGTTCATCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGHLGVP*GSSFLP
Trigger: AGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTG...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCCACCTGGGGGTGCCCTaGGGTTCATCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSHLGVP*GSSFLP
Trigger: AGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGTG...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGAGTTACGGAGCTCTCTaGGCCTCAGTCTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: LPACCLEGPGHSLSALRWSYGAL*ASVFPP
Trigger: CGGTGGGAAGACTGAGGCTCAGAGAGCTCCGTAACT...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR GCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCAGGGTGCAGACCCGCTaGCTTGGGGCGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPRVQTR*LGAPRS
Trigger: GCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCACCCT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSGAERR*HPEALS
Trigger: TGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCC...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCAGCGCCATGAACTCGTaGCGGCGCTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVSAMNS*RRSKAR
Trigger: CCTGGCCTTCGAGCGCCGGCACGAGTTCATGGCGCT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQRTTWG*PEVHPS
Trigger: GGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCG...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGGCAGGGGATCTCTGCTaGCAGGTTATAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVAGDLC*QVIELP
Trigger: GGGCAGCTCTATAACCTGCCAGCAGAGATCCCCTGC...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGCAGGGGATCTCTGCTaGCAGGTTATAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASAGDLC*QVIELP
Trigger: GGGCAGCTCTATAACCTGCCAGCAGAGATCCCCTGC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCAGATGTTGCCTGGAGTaGGGCCGTGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVRCCLE*GRGRVG
Trigger: CCCCACCCTCCCACGGCCCCACTCCAGGCAACATCT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAACAGGAAGTTGGGGTTaGTCCGGTCTGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQTGSWG*SGLKSP
Trigger: TGGAGACTTCAGACCGGACCAACCCCAACTTCCTGT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGATTCGGGGTGAGTTCTaGCGGCCGACTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGIRGEF*RPTPPS
Trigger: GCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAAT...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCAGTCCTGCCAGGGGATaGGGTAGAAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSPARG*GRRPQG
Trigger: CCCCTGAGGCCTTCTACCCCATCCCCTGGCAGGACT...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGTCCTGCCAGGGGATaGGGTAGAAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSPARG*GRRPQG
Trigger: CCCCTGAGGCCTTCTACCCCATCCCCTGGCAGGACT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGTCGAACCGCGTGCCCTaGCTCTTCTTGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASSNRVP*LFLFHT
Trigger: CGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGA...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCTGGCCTCGTGCGTCGTaGGGCAGTAGCGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVWPRAS*GSSGHA
Trigger: TGCATGCCCGCTACTGCCCCACGACGCACGAGGCCA...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAGCTTTCCGCACCACCTaGGGGTGCCCTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPAFRTT*GCPEVH
Trigger: ATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGC...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGGGGTTGGTCCGGTCTaGAGTCTCCAGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASGVGPV*SLQEED
Trigger: ATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTACTCCACCGAGCACATaGACAGGAAGTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GHSLSALRWLWHHVSALPTPPST*TGSWGW
Trigger: CCAACCCCAACTTCCTGTTCATGTGCTCGGTGGAGT...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVEAAQK*DAQVPG
Trigger: CCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCCGCCGAACTTCCACATaGGTGCGATCCTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSRRTST*VRSWRR
Trigger: ACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCG...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGCCAGGAAGAAGATGTTaGCTGGAGTGGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGPGRRC*LEWGRG
Trigger: CCCACGGCCCCACTCCAGGCAACATCTTCTTCCTGG...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSSEVR*PGAGAE
Trigger: CTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGGCTCTCGGCCAGGCTaGGGATGGAACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGGSRPG*GWNTTS
Trigger: AGAAGTGGTGTTCCATCCGCAGCCTGGCCGAGAGCC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQWPRTA*PGSSCS
Trigger: GGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCA...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQSSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGCTCCTCAACAGCCTaGCTAAGCCCGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSSSTA*LSPVAA
Trigger: AGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGACCATGTGTCAGCCCTaGCTCGAGACAGGACACTGT +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWTMCQP*LETGHC
Trigger: ACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGCACCTCTGTCCCAACTaGCTGGCTTTCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGHLCPN*LAFRTT
Trigger: GGTGGTGCGGAAAGCCAGGCAGTTGGGACAGAGGTG...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGGGTCTCCCCCAGCCCTaGCACTTTCCTACCAACAGC +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQGLPQP*HFPTNS
Trigger: GCTGTTGGTAGGAAAGTGGCAGGGCTGGGGGAGACC...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGAGCAGGCTTGGACCCTaGTCCTGGGGAAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVSRLGP*SWGKDC
Trigger: ACAGTCTTTTCCCCAGGAGCAGGGTCCAAGCCTGCT...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGGGTGCCCAGCACGTTaGTCAGGTTCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGGCPAR*SGSAGS
Trigger: AGAACCTGCGGAACCTGACCAACGTGCTGGGCACCC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGGGGTGCCCAGCACGTTaGTCAGGTTCCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQGCPAR*SGSAGS
Trigger: AGAACCTGCGGAACCTGACCAACGTGCTGGGCACCC...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGGGCCAGCAGTGCCCTaGACGTGGCCTCGAACCGCG +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPGPAVP*TWPRTA
Trigger: CGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGTTGGGGAGGTGACCTaGCGGGCCCCTCACAAGTAC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVVGEVT*RAPHKY
Trigger: GTACTTGTGAGGGGCCCGCCAGGTCACCTCCCCAAC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCTCTGTCCCAACTGCCTaGCTTTCCGCACCACCTGGG +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSVPTA*LSAPPG
Trigger: CCCAGGTGGTGCGGAAAGCCAGGCAGTTGGGACAGA...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAACCGGCTGTGTGACCTaGGGCAAGTTACGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSRRPGALTERPPLAMAPTGCVT*GKLRSS
Trigger: AGAGCTCCGTAACTTGCCCCAGGTCACACAGCCGGT...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR TCA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGCCTGTCCATGCCAGGTaGCTTTCTCAGCATCTCACA +
Preference number: 4 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVPVHAR*LSQHLT
Trigger: TGTGAGATGCTGAGAAAGTCACCTGGCATGGACAGG...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVSSEVR*PGAGAE
Trigger: CTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVWPRTA*PGSSCS
Trigger: GGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCA...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGAGGTTCATCCTTCCTaGCTGTTGTCTAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALTERPPLAMAPCVSPASEVHPS*LLSRRP
Trigger: GGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTC...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGGTCTCCCCCAGCCCTaGCACTTTCCTACCAACAGC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVGLPQP*HFPTNS
Trigger: GCTGTTGGTAGGAAAGTGGCAGGGCTGGGGGAGACC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGCACTTCTGGGCCTCTaGCCCACTCAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVALLGL*PTQSLL
Trigger: CAACAGGGACTGAGTGGGGCAGAGGCCCAGAAGTGC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCAGGGGATCTCTGCTaGCAGGTTATAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGAGDLC*QVIELP
Trigger: GGGCAGCTCTATAACCTGCCAGCAGAGATCCCCTGC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGAAGAAGATGTTGCCTaGAGTGGGGCCGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVEEDVA*SGAVGG
Trigger: CCCTCCCACGGCCCCACTCCAGGCAACATCTTCTTC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTACAGGAAGTTGGGGTTaGTCCGGTCTGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCLLSRRPGALTERPPLATGSWG*SGLKSP
Trigger: TGGAGACTTCAGACCGGACCAACCCCAACTTCCTGT...AGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCTCCAGCGGGAGCATCTaGACATTCGGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSSGSI*TFGKQL
Trigger: GAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGA...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCTCGAACCGCGTGCCCTaGCTCTTCTTGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSNRVP*LFLFHT
Trigger: CGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGA...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGTCGAACCGCGTGCCCTaGCTCTTCTTGTTCCACACG +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGSNRVP*LFLFHT
Trigger: CGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGA...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGCAGTGCCCTGGACGTaGCCTCGAACCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPAVPWT*PRTACP
Trigger: AGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGCTTTCCGCACCACCTaGGGGTGCCCTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVAFRTT*GCPEVH
Trigger: ATGAACCTCAGGGCACCCCCAGGTGGTGCGGAAAGC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGGGGTTGGTCCGGTCTaGAGTCTCCAGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGGVGPV*SLQEED
Trigger: ATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGGGGGTTGGTCCGGTCTaGAGTCTCCAGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQGVGPV*SLQEED
Trigger: ATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCC...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQELPHE*DPGGVG
Trigger: TCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTC...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCCGGCTGGTCTTCTTTaGCAACACGAACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVPAGLL*QHEHGP
Trigger: AGGGCCGTGTTCGTGTTGGCAAAGAAGACCAGCCGG...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381278.4
CDS-3UTR GCA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGTGTCCATCCTGTCCATaGCAGGTGACTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SILPPREGRPSAPSGAGWCPSCP*QVTFSA
Trigger: TGCTGAGAAAGTCACCTGGCATGGACAGGATGGACA...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGCAGGGGATCTCTGCTaGCAGGTTATAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVAGDLC*QVIELP
Trigger: GGGCAGCTCTATAACCTGCCAGCAGAGATCCCCTGC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCAGATGTTGCCTGGAGTaGGGCCGTGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPRCCLE*GRGRVG
Trigger: CCCCACCCTCCCACGGCCCCACTCCAGGCAACATCT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCTCCAGCGGGAGCATCTaGACATTCGGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVSSGSI*TFGKQL
Trigger: GAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGA...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCAGTGAGATGCCCAGGTaGCGGGGCAGAGAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPSEMPR*RGREAL
Trigger: CAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVELPHE*DPGGVG
Trigger: TCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGAGGTTCATCCTTCCTaGCTGTTGTCTAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGEVHPS*LLSRRP
Trigger: GGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGAGGTTCATCCTTCCTaGCTGTTGTCTAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGEVHPS*LLSRRP
Trigger: GGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCATTCGGGGTGAGTTCTaGCGGCCGACTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPIRGEF*RPTPPS
Trigger: GCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAAT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCAGTCCTGCCAGGGGATaGGGTAGAAGGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPSPARG*GRRPQG
Trigger: CCCCTGAGGCCTTCTACCCCATCCCCTGGCAGGACT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCCGCCGAACTTCCACATaGGTGCGATCCTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPRRTST*VRSWRR
Trigger: ACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCG...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCGCAGCTCCTCGGGGTTaGTGTCCTCAAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVAAPRG*CPQSTS
Trigger: AGAAGTACTTTGAGGACATCAACCCCGAGGAGCTGC...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCACAGGAAGTTGGGGTTaGTCCGGTCTGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVTGSWG*SGLKSP
Trigger: TGGAGACTTCAGACCGGACCAACCCCAACTTCCTGT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCACAAGTACATTTTCATaGCCTCGTGCGTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVTSTFS*PRASWG
Trigger: GCCCCACGACGCACGAGGCCATGAAAATGTACTTGT...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCTCCAGCGGGAGCATCTaGACATTCGGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPSSGSI*TFGKQL
Trigger: GAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGA...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSEAAQK*DAQVPG
Trigger: CCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSGAERR*HPEALS
Trigger: TGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCCGCACCACCTGGGGGTaGCCTGAGGTTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSRTTWG*PEVHPS
Trigger: GGAAGGATGAACCTCAGGGCACCCCCAGGTGGTGCG...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGCAGCTCCTCGGGGTTaGTGTCCTCAAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPAAPRG*CPQSTS
Trigger: AGAAGTACTTTGAGGACATCAACCCCGAGGAGCTGC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCCTGAGCGCCCTCCGCTaGCTATGGCACCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSLSALR*LWHHVS
Trigger: TGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAG...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR TCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGGGGTTGGTCCGGTCTaGAGTCTCCAGGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSGVGPV*SLQEED
Trigger: ATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR GCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSELPHE*DPGGVG
Trigger: TCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCACCTCTCTTTCCTGGTaGCCAGGAACATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSTSLSW*PGTCPG
Trigger: ACCTGGGCATGTTCCTGGCCACCAGGAAAGAGAGGT...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR TCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGCAGCTCCTCGGGGTTaGTGTCCTCAAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSAAPRG*CPQSTS
Trigger: AGAAGTACTTTGAGGACATCAACCCCGAGGAGCTGC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CCA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCACAAGTACATTTTCATaGCCTCGTGCGTCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSTSTFS*PRASWG
Trigger: GCCCCACGACGCACGAGGCCATGAAAATGTACTTGT...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCTGCAGACCCGCTGCCTaGGGGCGCCCCGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSRALNLASPGRAAQCPICRPAA*GRPGAA
Trigger: GGCTGCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCA...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp CCGGCTGGTCAGCCTGGGCAGCCCATTGCAGAGAGGTGGGGATCCTaGCAGCCCACAGGCCTCCGGGAGACACGCCCTGGCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PAGQPGQPIAERWGS*QPTGLRETRPGSAA
Trigger: GGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGACCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CAA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGTGCAGACCCGCTGCCTaGGGGCGCCCCGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPACCLEGPGHSLSALRWCRPAA*GRPGAA
Trigger: GGCTGCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCA...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp CAGCAGGAACCGGCTGGTCAGCCTGGGCAGCCCATTGCAGAGAGGTaGGGATCCTGGCAGCCCACAGGCCTCCGGGAGACACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: QQEPAGQPGQPIAER*GSWQPTGLRETRPG
Trigger: GCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGACCAGCCGGTTCCTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CAA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCTGGGTGCCCAGCACGTaGGTCAGGTTCCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASLSRALNLASPGRAAQCWVPST*VRFRRF
Trigger: GAACCTGCGGAACCTGACCAACGTGCTGGGCACCCA...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SILPPREGRPSAPSGAGWPGPSI*PPREGR
Trigger: CCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGG...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVPGPSI*PPREGR
Trigger: CCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGG...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCCCGGGCCCTCAATCTaGCCTCCCCGGGAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: ALTERPPLAMAPCVSPASPGPSI*PPREGR
Trigger: CCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGTGCAGACCCGCTGCCTaGGGGCGCCCCGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGCRPAA*GRPGAA
Trigger: GGCTGCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCA...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCGGGGCAGAGAGGCGTaGCCACCCGGAAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGRGREA*PPGSPF
Trigger: GAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCG...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCACCGGCTGGTCTTCTTaGCCAACACGAACACGGCCC +
Preference number: 5 (lower is better)
Translates to: ASLSRALNLASPGRAAQCTGWSS*PTRTRP
Trigger: GGGCCGTGTTCGTGTTGGCAAAGAAGACCAGCCGGT...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381278.4
CDS GCA 90 bp CGCTGTCACCCCTGGGACCCGGGTCGGCCTGATCCCACCGCCTCCTaGCGGGACCGTGCTAAGGGCATTGCCTGCATCACCCCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: RCHPWDPGRPDPTAS*RDRAKGIACITPVF
Trigger: AAACACTGGGGTGATGCAGGCAATGCCCTTAGCACGGTCCCGGCAGGAGGCGGTGGGATCAGGCCGACCCGGGTCCCAGGGGTGACAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS CCA 90 bp GTAACTGACCAGCCTGGGCAGCCCATTGCAGAGAGGTGGGGATCCTaGCAGCCCACAGGCCTCCGGGAGACACGCCCTGGCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VTDQPGQPIAERWGS*QPTGLRETRPGSAA
Trigger: GGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGGTCAGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CCA 90 bp CACTGGCTGGTAACTGACCAGCCTGGGCAGCCCATTGCAGAGAGGTaGGGATCCTGGCAGCCCACAGGCCTCCGGGAGACACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HWLVTDQPGQPIAER*GSWQPTGLRETRPG
Trigger: GCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGGTCAGTTACCAGCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS-3UTR CAA 90 bp TATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCTGCAGACCCGCTGCCTaGGGGCGCCCCGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: YGTMCQPCLETGHCPRGVCRPAA*GRPGAA
Trigger: GGCTGCTCCGGGGCGCCCCAAGGCAGCGGGTCTGCA...GACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGCTGCCCTTTCTCCTaGGGCTCTCCCACAACGTGC +
Preference number: 5 (lower is better)
Translates to: LSRALNLASPGRAAQCPISCPFS*GSPTTC
Trigger: GCACGTTGTGGGAGAGCCCAAGGAGAAAGGGCAGCT...GATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGGGGCAGAGAGGCGTaGCCACCCGGAAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GHSLSALRWLWHHVSALPRGREA*PPGSPF
Trigger: GAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCG...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp GAGGTGGGGATCCTGGCAGCCCACAGGCCTCCGGGAGACACGCCCTaGCTCAGCAGCCGACCTTCTTTGCCAACACGAACACGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: EVGILAAHRPPGDTP*LSSRPSLPTRTRPF
Trigger: GAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS CCA 90 bp TGGGGCAGTAGCGGGCATGCAGCTGGGCCAGCAGTGCCCTGGACGTaGCCTCGAACCGCGTGCCCTGGCTCTTCTTGTTCCACACGTGGA +
Preference number: 5 (lower is better)
Translates to: WGSSGHAAGPAVPWT*PRTACPGSSCSTRG
Trigger: TCCACGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCCAGCTGCATGCCCGCTACTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp CCTGGCGGGCCCCTCACAAGTACATTTTCATGGCCTCGTGCGTCGTaGGGCAGTAGCGGGCATGCAGCTGGGCCAGCAGTGCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: PGGPLTSTFSWPRAS*GSSGHAAGPAVPWT
Trigger: CGTCCAGGGCACTGCTGGCCCAGCTGCATGCCCGCTACTGCCCCACGACGCACGAGGCCATGAAAATGTACTTGTGAGGGGCCCGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAAGCAGCCGACCTTCTTaGCCAACACGAACACGGCCC +
Preference number: 5 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQSSRPS*PTRTRP
Trigger: GGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CAA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAAGCTGCCCTTTCTCCTaGGGCTCTCCCACAACGTGC +
Preference number: 5 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQSCPFS*GSPTTC
Trigger: GCACGTTGTGGGAGAGCCCAAGGAGAAAGGGCAGCT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GCCTCCCTCTCCCGGGCCCTCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCATGGAACACCACTTCTaGAAGACCCGCGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASLSRALNLASPGRAAQCMEHHF*KTRVSS
Trigger: GCTGCTCACGCGGGTCTTCAAGAAGTGGTGTTCCAT...GCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGAGGGCCCGGGAGAGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGCATCCTTCCTGCCTGTaGTCTAGAAGGCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPHPSCL*SRRPGA
Trigger: TGCCCCGGGCCTTCTAGACAACAGGCAGGAAGGATG...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGGGAGGAGCAGCAGGCTaGGACCCTGCTCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVGGAAG*DPAPGE
Trigger: TTCCCCAGGAGCAGGGTCCAAGCCTGCTGCTCCTCC...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CAA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTGTGCCTCGCAGGTGGTaGGAGGAGCAGCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GHSLSALRWLWHHVSALPVPRRW*EEQQAW
Trigger: CCAAGCCTGCTGCTCCTCCAACCACCTGCGAGGCAC...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS-3UTR CAA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGAGCAGCCGACCTTCTTaGCCAACACGAACACGGCCC +
Preference number: 5 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGSSRPS*PTRTRP
Trigger: GGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCT...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS-3UTR CAA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGCGGGGCAGAGAGGCGTaGCCACCCGGAAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGRGREA*PPGSPF
Trigger: GAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCG...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTGGGTGCCCAGCACGTaGGTCAGGTTCCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVWVPST*VRFRRF
Trigger: GAACCTGCGGAACCTGACCAACGTGCTGGGCACCCA...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGTGGGTGCCCAGCACGTaGGTCAGGTTCCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SILPPREGRPSAPSGAGWWVPST*VRFRRF
Trigger: GAACCTGCGGAACCTGACCAACGTGCTGGGCACCCA...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CAGCTCCTCAACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGTGCCCTGGCTCTTCTaGTTCCACACGTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: QLLNSLPKPGGSSGLPLPVPWLF*FHTWTA
Trigger: TGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCAC...CGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTTGAGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCATCCTTCCTGCCTGTaGTCTAGAAGGCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGHPSCL*SRRPGA
Trigger: TGCCCCGGGCCTTCTAGACAACAGGCAGGAAGGATG...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp CAGGTCCAGCGGGAGCATCTGGACATTCGGGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGGCAGAGAGGCGTTGCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: QVQREHLDIREAAQK*DAQVPGQRGVATRK
Trigger: CTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp CCAGCGGGAGCATCTGGACATTCGGGAAGCAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAGAGGCGTTGCCACCCGGAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: PAGASGHSGSSSEVR*PGAGAERRCHPEAL
Trigger: AAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp CATGCAGCTGGGCCAGCAGTGCCCTGGACGTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCCACACGTGGACAGCATAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: HAAGPAVPWTWPRTA*PGSSCSTRGQHRWH
Trigger: GTGCCACCTATGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCCAGCTGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp AGGGGTGTGTCCCGGAACAGCTCCCGCAGGTCCAGCGGGAGCATCTaGACATTCGGGAAGCAGCTCAGAAGTGAGATGCCCAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RGVSRNSSRRSSGSI*TFGKQLRSEMPRCR
Trigger: CCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGCTCCCGCTGGACCTGCGGGAGCTGTTCCGGGACACACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 90 bp AATCCATCTCGATATTCTGCAGTGGAGAAGGGACGCTGTCACCCCTaGGACCCGGGTCGGCCTGATCCCACCGCCTCCTGCCGGGACCGT +
Preference number: 5 (lower is better)
Translates to: NPSRYSAVEKGRCHP*DPGRPDPTASCRDR
Trigger: ACGGTCCCGGCAGGAGGCGGTGGGATCAGGCCGACCCGGGTCCCAGGGGTGACAGCGTCCCTTCTCCACTGCAGAATATCGAGATGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCCAGGAAGAAGATGTaGCCTGGAGTGGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVSRKKM*PGVGPW
Trigger: CCACGGCCCCACTCCAGGCAACATCTTCTTCCTGGA...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp AACAGCCTGCCTAAGCCCGGTGGCAGCTCGGGCCTCCCTCTCCCGGGCCCTCAAATGGAACACCACTTCTaGAAGACCCGCGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: NSLPKPGGSSGLPLPGPQMEHHF*KTRVSS
Trigger: GCTGCTCACGCGGGTCTTCAAGAAGTGGTGTTCCAT...TTGAGGGCCCGGGAGAGGGAGGCCCGAGCTGCCACCGGGCTTAGGCAGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp ACAGGCCTCCGGGAGACACGCCCTGGCTCAGCAGCCGACCTTCTTTaGCAACACGAACACGGCCCTTCCACACACTTGCAGCGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TGLRETRPGSAADLL*QHEHGPSTHLQRLQ
Trigger: TTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS GCA 90 bp AGCAGCTCAGAAGTGAGATGCCCAGGTGCCGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCATCAGGACCAGCACGTGGGATTCGG +
Preference number: 5 (lower is better)
Translates to: SSSEVRCPGAGAERR*HPEALSSGPARGIR
Trigger: CCGAATCCCACGTGCTGGTCCTGATGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp CAGCCGACCTTCTTTGCCAACACGAACACGGCCCTTCCACACACTTaGAGCGGCTGCAAATCCATCTCTAGCTCCAGCGGCGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: QPTFFANTNTALPHT*SGCKSISSSSGGGR
Trigger: CCGCCCGCCGCCGCTGGAGCTAGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483026.2
ENST00000642412.2
CDS GCA 90 bp TTCTTTGCCAACACGAACACGGCCCTTCCACACACTTGCAGCGGCTaGAAATCCATCTCTAGCTCCAGCGGCGGCGGGCGGCGGACAGCG +
Preference number: 5 (lower is better)
Translates to: FFANTNTALPHTCSG*KSISSSSGGGRRTA
Trigger: CGCTGTCCGCCGCCCGCCGCCGCTGGAGCTAGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642412.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGGGCCCTTCCACACACTaGCAGCGGCTGCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVGPSTH*QRLQIH
Trigger: ATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCC...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000642412.2
CDS-3UTR CAA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGGGCAGCTCCTCGGGGTaGATGTCCTCAAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGGSSSG*MSSKYF
Trigger: GAAGTACTTTGAGGACATCAACCCCGAGGAGCTGCC...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCACATCCTTCCTGCCTGTaGTCTAGAAGGCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: LSRRPGALTERPPLAMAPHPSCL*SRRPGA
Trigger: TGCCCCGGGCCTTCTAGACAACAGGCAGGAAGGATG...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp CTGCCATTAGACCTCTCTTTCCTGGTGGCCAGGAACATGCCCAGGTaGCTCGCAGGTGGTTGGAGGAGCAGCAGGCTTGGACCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPLDLSFLVARNMPR*LAGGWRSSRLGPCS
Trigger: GGAGCAGGGTCCAAGCCTGCTGCTCCTCCAACCACCTGCGAGGCACCTGGGCATGTTCCTGGCCACCAGGAAAGAGAGGTCTAATGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS GCA 90 bp GCCCTTCCACACACTTGCAGCGGCTGCAAATCCATCTCGATATTCTaGAGTGGAGAAGGGACGCTGTCACCCCTGGGACCCGGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: ALPHTCSGCKSISIF*SGEGTLSPLGPGSA
Trigger: GGCCGACCCGGGTCCCAGGGGTGACAGCGTCCCTTCTCCACTGCAGAATATCGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS-3UTR CAA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAGCTGCCCTTTCTCCTaGGGCTCTCCCACAACGTGC +
Preference number: 5 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGSCPFS*GSPTTC
Trigger: GCACGTTGTGGGAGAGCCCAAGGAGAAAGGGCAGCT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCAGCTGCCCTTTCTCCTaGGGCTCTCCCACAACGTGC +
Preference number: 5 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSSCPFS*GSPTTC
Trigger: GCACGTTGTGGGAGAGCCCAAGGAGAAAGGGCAGCT...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGTCCAGGAAGAAGATGTaGCCTGGAGTGGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQSRKKM*PGVGPW
Trigger: CCACGGCCCCACTCCAGGCAACATCTTCTTCCTGGA...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGTCCAGGAAGAAGATGTaGCCTGGAGTGGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGSRKKM*PGVGPW
Trigger: CCACGGCCCCACTCCAGGCAACATCTTCTTCCTGGA...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGAACAGGAAGTTGGGGTaGGTCCGGTCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LPACCLEGPGHSLSALRWNRKLG*VRSEVS
Trigger: GGAGACTTCAGACCGGACCAACCCCAACTTCCTGTT...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGCACATGAACAGGAAGTaGGGGTTGGTCCGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: QSCLPGKGGPVPHQEQVGHMNRK*GLVRSE
Trigger: TTCAGACCGGACCAACCCCAACTTCCTGTTCATGTG...CCCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGATGGAACACCACTTCTaGAAGACCCGCGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SILPPREGRPSAPSGAGWMEHHF*KTRVSS
Trigger: GCTGCTCACGCGGGTCTTCAAGAAGTGGTGTTCCAT...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGATGGAACACCACTTCTaGAAGACCCGCGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPACCLEGPGHSLSALRWMEHHF*KTRVSS
Trigger: GCTGCTCACGCGGGTCTTCAAGAAGTGGTGTTCCAT...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGGGCAGCTCCTCGGGGTaGATGTCCTCAAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: SILPPREGRPSAPSGAGWGSSSG*MSSKYF
Trigger: GAAGTACTTTGAGGACATCAACCCCGAGGAGCTGCC...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp CCACCCGGAAGCCCTTTCATCAGGACCAGCACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCCACCGAGCACATGAACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PPGSPFIRTSTWDSG*VLAADSTEHMNRKL
Trigger: CAACTTCCTGTTCATGTGCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGTGCTGGTCCTGATGAAAGGGCTTCCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp CAGGGTAGAGAGCAGGGAACCTCGCTGATGTCACTGGCTGGTAACTaGCCAGCCTGGGCAGCCCATTGCAGAGAGGTGGGGATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: QGREQGTSLMSLAGN*PAWAAHCREVGILA
Trigger: TGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGGTCAGTTACCAGCCAGTGACATCAGCGAGGTTCCCTGCTCTCTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS GCA 90 bp AGCATCTGGACATTCGGGAAGCAGCTCAGAAGTGAGATGCCCAGGTaGCGGGGCAGAGAGGCGTTGCCACCCGGAAGCCCTTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: SIWTFGKQLRSEMPR*RGREALPPGSPFIR
Trigger: CCTGATGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 90 bp AATGAAGTCCGTGTCCAGGTAGATGCCGCCGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGAGAGCACGGGCAGCAGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: NEVRVQVDAAELPHE*DPGGVGEHGQQVGL
Trigger: GAGCCCTACCTGCTGCCCGTGCTCTCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCGGCATCTACCTGGACACGGACTTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp ACCTGGGGGTGCCCTGAGGTTCATCCTTCCTGCCTGTTGTCTAGAAGGCCCGGGGGCCCTTCCACACACTaGCAGCGGCTGCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: TWGCPEVHPSCLLSRRPGGPSTH*QRLQIH
Trigger: ATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCC...CCCGGGCCTTCTAGACAACAGGCAGGAAGGATGAACCTCAGGGCACCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000642412.2
CDS-3UTR CAA 90 bp TTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCAAACAGGAAGTTGGGGTaGGTCCGGTCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LSRRPGALTERPPLAMAPNRKLG*VRSEVS
Trigger: GGAGACTTCAGACCGGACCAACCCCAACTTCCTGTT...TGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCACATGAACAGGAAGTaGGGGTTGGTCCGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: GHSLSALRWLWHHVSALPHMNRK*GLVRSE
Trigger: TTCAGACCGGACCAACCCCAACTTCCTGTTCATGTG...AGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGCACATGAACAGGAAGTaGGGGTTGGTCCGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: ALTERPPLAMAPCVSPASHMNRK*GLVRSE
Trigger: TTCAGACCGGACCAACCCCAACTTCCTGTTCATGTG...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCAATCTTGCCTCCCCGGGAAGGGCGGCCCAGTGCCCCATCAGGAGCAGGTTGGCACATGAACAGGAAGTaGGGGTTGGTCCGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: SILPPREGRPSAPSGAGWHMNRK*GLVRSE
Trigger: TTCAGACCGGACCAACCCCAACTTCCTGTTCATGTG...CCAACCTGCTCCTGATGGGGCACTGGGCCGCCCTTCCCGGGGAGGCAAGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGCCCTGGCTCTTCTaGTTCCACACGTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGVPWLF*FHTWTA
Trigger: TGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCAC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGGTGCCCTGGCTCTTCTaGTTCCACACGTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQVPWLF*FHTWTA
Trigger: TGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCAC...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp CGTGGGATTCGGGGTGAGTTCTGGCGGCCGACTCCACCGAGCACATaGACAGGAAGTTGGGGTTGGTCCGGTCTGAAGTCTCCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: RGIRGEFWRPTPPST*TGSWGWSGLKSPGR
Trigger: TCTTCCTGGAGACTTCAGACCGGACCAACCCCAACTTCCTGTTCATGTGCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAATCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp AACTTAGGCTGGGCCCTTCCCAGGGTAGAGAGCAGGGAACCTCGCTaGTGTCACTGGCTGGTAACTGACCAGCCTGGGCAGCCCATTGCA +
Preference number: 5 (lower is better)
Translates to: NLGWALPRVESREPR*CHWLVTDQPGQPIA
Trigger: TGCAATGGGCTGCCCAGGCTGGTCAGTTACCAGCCAGTGACATCAGCGAGGTTCCCTGCTCTCTACCCTGGGAAGGGCCCAGCCTAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CCA 90 bp TCCACACACTTGCAGCGGCTGCAAATCCATCTCGATATTCTGCAGTaGAGAAGGGACGCTGTCACCCCTGGGACCCGGGTCGGCCTGATC +
Preference number: 5 (lower is better)
Translates to: STHLQRLQIHLDILQ*RRDAVTPGTRVGLI
Trigger: GATCAGGCCGACCCGGGTCCCAGGGGTGACAGCGTCCCTTCTCCACTGCAGAATATCGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS-3UTR CAA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGAACAGGAAGTTGGGGTaGGTCCGGTCTGAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGNRKLG*VRSEVS
Trigger: GGAGACTTCAGACCGGACCAACCCCAACTTCCTGTT...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTTCCTGCCTGTTGTCTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGAGGTTCCGCAGGTTCTaGAGAACAATGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LPACCLEGPGHSLSALRWRFRRF*RTMKSV
Trigger: CACGGACTTCATTGTTCTCAAGAACCTGCGGAACCT...CCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAGACAACAGGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTAGAAGGCCCGGGGCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGAGGTTCCGCAGGTTCTaGAGAACAATGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LEGPGHSLSALRWLWHHVRFRRF*RTMKSV
Trigger: CACGGACTTCATTGTTCTCAAGAACCTGCGGAACCT...CACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGCCCCGGGCCTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCGGCAGCTCCTCGGGGTaGATGTCCTCAAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSGSSSG*MSSKYF
Trigger: GAAGTACTTTGAGGACATCAACCCCGAGGAGCTGCC...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CTGGCTATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGGCAGCTCCTCGGGGTaGATGTCCTCAAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: LAMAPCVSPASRQDTVLGGSSSG*MSSKYF
Trigger: GAAGTACTTTGAGGACATCAACCCCGAGGAGCTGCC...CCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCATAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp GGTGCCAGGAAACCTGGGCATAAAGTCAAGGGACTGGGTGCAACCTaGTTGCTAAGGGGAGCTAAGAGTCGGTCCCCTCCCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GARKPGHKVKGLGAT*LLRGAKSRSPPKDR
Trigger: CCTGTCCTTGGGAGGGGACCGACTCTTAGCTCCCCTTAGCAATCAGGTTGCACCCAGTCCCTTGACTTTATGCCCAGGTTTCCTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS-3UTR CAA 90 bp GCACTCACTGAGCGCCCTCCGCTGGCTATGGCACCATGTGTCAGCCCTGCCTCGACGAAAAACGTGAACTaGAAGCCGATGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: ALTERPPLAMAPCVSPASTKNVN*KPMMNR
Trigger: CCTGTTCATCATCGGCTTCAAGTTCACGTTTTTCGT...CGAGGCAGGGCTGACACATGGTGCCATAGCCAGCGGAGGGCGCTCAGTGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp ATGGCACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCAGGTTCCGCAGGTTCTaGAGAACAATGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: MAPCVSPASRQDTVLGVSRFRRF*RTMKSV
Trigger: CACGGACTTCATTGTTCTCAAGAACCTGCGGAACCT...GGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGAGGTTCCGCAGGTTCTaGAGAACAATGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQRFRRF*RTMKSV
Trigger: CACGGACTTCATTGTTCTCAAGAACCTGCGGAACCT...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 90 bp TTAACAGCCAGCGGGATCACCATCGACTCTGACTTCTACGCTCCATaGCAAAGTCACACCCCCTTTGACCCTCAGCAAGCCCGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LTASGITIDSDFYAP*QSHTPFDPQQARGA
Trigger: TGCCCCTCGGGCTTGCTGAGGGTCAAAGGGGGTGTGACTTTGTCATGGAGCGTAGAAGTCAGAGTCGATGGTGATCCCGCTGGCTGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483026.2
CDS-3UTR CAA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCGTGCCCTGGCTCTTCTaGTTCCACACGTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPVPWLF*FHTWTA
Trigger: TGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCAC...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp CACCATGTGTCAGCCCTGCCTCGAGACAGGACACTGTCCTCGGGGTGTCCACAGACGAAAAACGTGAACTaGAAGCCGATGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: HHVSALPRDRTLSSGCPQTKNVN*KPMMNR
Trigger: CCTGTTCATCATCGGCTTCAAGTTCACGTTTTTCGT...CTGTGGACACCCCGAGGACAGTGTCCTGTCTCGAGGCAGGGCTGACACATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTCCAGGAAGAAGATGTaGCCTGGAGTGGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSSRKKM*PGVGPW
Trigger: CCACGGCCCCACTCCAGGCAACATCTTCTTCCTGGA...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCGGCCCTTCCACACACTaGCAGCGGCTGCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSGPSTH*QRLQIH
Trigger: ATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCC...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000642412.2
CDS-3UTR CAA 90 bp CGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCTGAGCCTAAAGAGCCTCCCCACGAAAAACGTGAACTaGAAGCCGATGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: RQGGGFFKMLLLSLKSLPTKNVN*KPMMNR
Trigger: CCTGTTCATCATCGGCTTCAAGTTCACGTTTTTCGT...GGGGAGGCTCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS-3UTR CAA 90 bp TCCTGTGTTTATAATGCGGGCGGCAGGGTGGGGGTTTCTTTAAAATGCTTCTCCACGAAAAACGTGAACTaGAAGCCGATGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: SCVYNAGGRVGVSLKCFSTKNVN*KPMMNR
Trigger: CCTGTTCATCATCGGCTTCAAGTTCACGTTTTTCGT...GGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCGCATTATAAACACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp CCCTGGGACCCGGGTCGGCCTGATCCCACCGCCTCCTaGCGGGACCGTGCTAAGGGCATTGCCTGCATCACC +
Preference number: 6 (lower is better)
Translates to: PWDPGRPDPTAS*RDRAKGIACIT
Trigger: GGTGATGCAGGCAATGCCCTTAGCACGGTCCCGGCAGGAGGCGGTGGGATCAGGCCGACCCGGGTCCCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS TCA 72 bp ACTCGTGCCGGCGCTCGAAGGCCAGGAACGCGCCGTTaGGGACGTAGCGGGACTGGGTGCCCAGCACGTTGG +
Preference number: 6 (lower is better)
Translates to: TRAGARRPGTRR*GRSGTGCPARW
Trigger: CCAACGTGCTGGGCACCCAGTCCCGCTACGTCCTCAACGGCGCGTTCCTGGCCTTCGAGCGCCGGCACGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 72 bp CCGGCTGGTCAGCCTGGGCAGCCCATTGCAGAGAGGTaGGGATCCTGGCAGCCCACAGGCCTCCGGGAGACA +
Preference number: 6 (lower is better)
Translates to: PAGQPGQPIAER*GSWQPTGLRET
Trigger: TGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGACCAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249005.3
ENST00000642412.2
CDS CCA 72 bp GGCAGTAGCGGGCATGCAGCTGGGCCAGCAGTGCCCTaGACGTGGCCTCGAACCGCGTGCCCTGGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSSGHAAGPAVP*TWPRTACPGSS
Trigger: AGAAGAGCCAGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCCAGCTGCATGCCCGCTACTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CAA 72 bp GGTGGCCAGGAACATGCCCAGGTGCCTCGCAGGTGGTaGGAGGAGCAGCAGGCTTGGACCCTGCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: GGQEHAQVPRRW*EEQQAWTLLLG
Trigger: CCCCAGGAGCAGGGTCCAAGCCTGCTGCTCCTCCAACCACCTGCGAGGCACCTGGGCATGTTCCTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401850.5
CDS GCA 72 bp TCCACGAAGTCCCGCATGCACAGCGCCATGAACTCGTaGCGGCGCTCGAAGGCCAGGAACGCGCCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: STKSRMHSAMNS*RRSKARNAPLR
Trigger: CCTCAACGGCGCGTTCCTGGCCTTCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGCGGGACTTCGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 72 bp TGTAGTGGTCCACGAAGTCCCGCATGCACAGCGCCATaGACTCGTGCCGGCGCTCGAAGGCCAGGAACGCGC +
Preference number: 6 (lower is better)
Translates to: CSGPRSPACTAP*TRAGARRPGTR
Trigger: GCGCGTTCCTGGCCTTCGAGCGCCGGCACGAGTTCATGGCGCTGTGCATGCGGGACTTCGTGGACCACTACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp GGGCCAGCAGTGCCCTGGACGTGGCCTCGAACCGCGTaGCCTGGCTCTTCTTGTTCCACACGTGGACAGCAT +
Preference number: 6 (lower is better)
Translates to: GPAVPWTWPRTA*PGSSCSTRGQH
Trigger: ATGCTGTCCACGTGTGGAACAAGAAGAGCCAGGGCACGCGGTTCGAGGCCACGTCCAGGGCACTGCTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CCA 72 bp GTAACTGACCAGCCTGGGCAGCCCATTGCAGAGAGGTaGGGATCCTGGCAGCCCACAGGCCTCCGGGAGACA +
Preference number: 6 (lower is better)
Translates to: VTDQPGQPIAER*GSWQPTGLRET
Trigger: TGTCTCCCGGAGGCCTGTGGGCTGCCAGGATCCCCACCTCTCTGCAATGGGCTGCCCAGGCTGGTCAGTTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CAA 90 bp CACAGGCCTCCGGGAGACACGCCCTGGCTCAGCAGCCGACCTTCTTaGCCAACACGAACACGGCCCTTCCACACACTTGCAGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: HRPPGDTPWLSSRPS*PTRTRPFHTLAAAA
Trigger: TGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS TCA 72 bp CGGGAGCATCTGGACATTCGGGAAGCAGCTCAGAAGTaGGATGCCCAGGTGCCGGGGCAGAGAGGCGTTGCC +
Preference number: 6 (lower is better)
Translates to: REHLDIREAAQK*DAQVPGQRGVA
Trigger: GGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp GAAGTGAGATGCCCAGGTGCCGGGGCAGAGAGGCGTTaGCACCCGGAAGCCCTTTCATCAGGACCAGCACGT +
Preference number: 6 (lower is better)
Translates to: EVRCPGAGAERR*HPEALSSGPAR
Trigger: ACGTGCTGGTCCTGATGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp GCATCTGGACATTCGGGAAGCAGCTCAGAAGTGAGATaGCCAGGTGCCGGGGCAGAGAGGCGTTGCCACCCG +
Preference number: 6 (lower is better)
Translates to: ASGHSGSSSEVR*PGAGAERRCHP
Trigger: CGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTTCCCGAATGTCCAGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp CGTGTCCAGGTAGATGCCGCCGAACTTCCACATGAGTaGGATCCTGGAGGCGTCGGAGAGCACGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RVQVDAAELPHE*DPGGVGEHGQQ
Trigger: CTGCTGCCCGTGCTCTCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCGGCATCTACCTGGACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp AACACGAACACGGCCCTTCCACACACTTGCAGCGGCTaGAAATCCATCTCTAGCTCCAGCGGCGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: NTNTALPHTCSG*KSISSSSGGGR
Trigger: CCGCCCGCCGCCGCTGGAGCTAGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483026.2
ENST00000642412.2
CDS CCA 72 bp ATCCTGGCAGCCCACAGGCCTCCGGGAGACACGCCCTaGCTCAGCAGCCGACCTTCTTTGCCAACACGAACA +
Preference number: 6 (lower is better)
Translates to: ILAAHRPPGDTP*LSSRPSLPTRT
Trigger: TGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGGAGGCCTGTGGGCTGCCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS CCA 72 bp GGTGGTACTGGGAGCCTGGGGCTTGGTAACTTAGGCTaGGCCCTTCCCAGGGTAGAGAGCAGGGAACCTCGC +
Preference number: 6 (lower is better)
Translates to: GGTGSLGLGNLG*ALPRVESREPR
Trigger: GCGAGGTTCCCTGCTCTCTACCCTGGGAAGGGCCCAGCCTAAGTTACCAAGCCCCAGGCTCCCAGTACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CAA 72 bp AGAAGTGAGATGCCCAGGTGCCGGGGCAGAGAGGCGTaGCCACCCGGAAGCCCTTTCATCAGGACCAGCACG +
Preference number: 6 (lower is better)
Translates to: RSEMPRCRGREA*PPGSPFIRTST
Trigger: CGTGCTGGTCCTGATGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CAA 90 bp AAGCAGCTCAGAAGTGAGATGCCCAGGTGCCGGGGCAGAGAGGCGTaGCCACCCGGAAGCCCTTTCATCAGGACCAGCACGTGGGATTCG +
Preference number: 6 (lower is better)
Translates to: KQLRSEMPRCRGREA*PPGSPFIRTSTWDS
Trigger: CGAATCCCACGTGCTGGTCCTGATGAAAGGGCTTCCGGGTGGCAACGCCTCTCTGCCCCGGCACCTGGGCATCTCACTTCTGAGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 72 bp AGTCCGTGTCCAGGTAGATGCCGCCGAACTTCCACATaGGTGCGATCCTGGAGGCGTCGGAGAGCACGGGCA +
Preference number: 6 (lower is better)
Translates to: SPCPGRCRRTST*VRSWRRRRARA
Trigger: TGCCCGTGCTCTCCGACGCCTCCAGGATCGCACTCATGTGGAAGTTCGGCGGCATCTACCTGGACACGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 72 bp GAGCAGGGAACCTCGCTGATGTCACTGGCTGGTAACTaGCCAGCCTGGGCAGCCCATTGCAGAGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: EQGTSLMSLAGN*PAWAAHCREVG
Trigger: CCCCACCTCTCTGCAATGGGCTGCCCAGGCTGGTCAGTTACCAGCCAGTGACATCAGCGAGGTTCCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS TCA 72 bp TGGGCCCTTCCCAGGGTAGAGAGCAGGGAACCTCGCTaGTGTCACTGGCTGGTAACTGACCAGCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: WALPRVESREPR*CHWLVTDQPGQ
Trigger: CTGCCCAGGCTGGTCAGTTACCAGCCAGTGACATCAGCGAGGTTCCCTGCTCTCTACCCTGGGAAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS GCA 72 bp CGGGAGACACGCCCTGGCTCAGCAGCCGACCTTCTTTaGCAACACGAACACGGCCCTTCCACACACTTGCAG +
Preference number: 6 (lower is better)
Translates to: RETRPGSAADLL*QHEHGPSTHLQ
Trigger: CTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS CCA 72 bp CCCCTCACAAGTACATTTTCATGGCCTCGTGCGTCGTaGGGCAGTAGCGGGCATGCAGCTGGGCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: PLTSTFSWPRAS*GSSGHAAGPAV
Trigger: CACTGCTGGCCCAGCTGCATGCCCGCTACTGCCCCACGACGCACGAGGCCATGAAAATGTACTTGTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CAA 72 bp CCGGGAGACACGCCCTGGCTCAGCAGCCGACCTTCTTaGCCAACACGAACACGGCCCTTCCACACACTTGCA +
Preference number: 6 (lower is better)
Translates to: PGDTPWLSSRPS*PTRTRPFHTLA
Trigger: TGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAGGTCGGCTGCTGAGCCAGGGCGTGTCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000465765.2
ENST00000483026.2
ENST00000642412.2
CDS TCA 72 bp CGGGGTGAGTTCTGGCGGCCGACTCCACCGAGCACATaGACAGGAAGTTGGGGTTGGTCCGGTCTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: RGEFWRPTPPST*TGSWGWSGLKS
Trigger: AGACTTCAGACCGGACCAACCCCAACTTCCTGTTCATGTGCTCGGTGGAGTCGGCCGCCAGAACTCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS TCA 72 bp AGCCCTTTCATCAGGACCAGCACGTGGGATTCGGGGTaGGTTCTGGCGGCCGACTCCACCGAGCACATGAAC +
Preference number: 6 (lower is better)
Translates to: SPFIRTSTWDSG*VLAADSTEHMN
Trigger: GTTCATGTGCTCGGTGGAGTCGGCCGCCAGAACTCACCCCGAATCCCACGTGCTGGTCCTGATGAAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CAA 72 bp ATCCCACCGCCTCCTGCCGGGACCGTGCTAAGGGCATaGCCTGCATCACCCCAGTGTTTGCGGAATTCCAGT +
Preference number: 6 (lower is better)
Translates to: IPPPPAGTVLRA*PASPQCLRNSS
Trigger: ACTGGAATTCCGCAAACACTGGGGTGATGCAGGCAATGCCCTTAGCACGGTCCCGGCAGGAGGCGGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS CCA 72 bp TTGCAGCGGCTGCAAATCCATCTCGATATTCTGCAGTaGAGAAGGGACGCTGTCACCCCTGGGACCCGGGTC +
Preference number: 6 (lower is better)
Translates to: LQRLQIHLDILQ*RRDAVTPGTRV
Trigger: GACCCGGGTCCCAGGGGTGACAGCGTCCCTTCTCCACTGCAGAATATCGAGATGGATTTGCAGCCGCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS CAA 90 bp GTTCTGGCGGCCGACTCCACCGAGCACATGAACAGGAAGTTGGGGTaGGTCCGGTCTGAAGTCTCCAGGAAGAAGATGTTGCCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: VLAADSTEHMNRKLG*VRSEVSRKKMLPGV
Trigger: CACTCCAGGCAACATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCCAACTTCCTGTTCATGTGCTCGGTGGAGTCGGCCGCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS GCA 72 bp TTCTTTGCCAACACGAACACGGCCCTTCCACACACTTaGAGCGGCTGCAAATCCATCTCTAGCTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: FFANTNTALPHT*SGCKSISSSSG
Trigger: GCCGCTGGAGCTAGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381278.4
ENST00000483026.2
ENST00000642412.2
CDS GCA 72 bp ACCGCCTCCTGCCGGGACCGTGCTAAGGGCATTGCCTaGATCACCCCAGTGTTTGCGGAATTCCAGTTATTT +
Preference number: 6 (lower is better)
Translates to: TASCRDRAKGIA*ITPVFAEFQLF
Trigger: AAATAACTGGAATTCCGCAAACACTGGGGTGATGCAGGCAATGCCCTTAGCACGGTCCCGGCAGGAGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS TCA 72 bp AAACCTGGGCATAAAGTCAAGGGACTGGGTGCAACCTaGTTGCTAAGGGGAGCTAAGAGTCGGTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: KPGHKVKGLGAT*LLRGAKSRSPP
Trigger: GGGAGGGGACCGACTCTTAGCTCCCCTTAGCAATCAGGTTGCACCCAGTCCCTTGACTTTATGCCCAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CAA 72 bp GCCGACTCCACCGAGCACATGAACAGGAAGTTGGGGTaGGTCCGGTCTGAAGTCTCCAGGAAGAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: ADSTEHMNRKLG*VRSEVSRKKML
Trigger: CAACATCTTCTTCCTGGAGACTTCAGACCGGACCAACCCCAACTTCCTGTTCATGTGCTCGGTGGAGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249005.3
ENST00000381278.4
ENST00000401850.5
ENST00000642412.2
CDS CAA 90 bp CCATCGACTCTGACTTCTACGCTCCATGACAAAGTCACACCCCCTTaGACCCTCAGCAAGCCCGAGGGGCAGTTGCATCGTTTCTACTTT +
Preference number: 6 (lower is better)
Translates to: PSTLTSTLHDKVTPP*TLSKPEGQLHRFYF
Trigger: AAAGTAGAAACGATGCAACTGCCCCTCGGGCTTGCTGAGGGTCAAAGGGGGTGTGACTTTGTCATGGAGCGTAGAAGTCAGAGTCGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465765.2
ENST00000483026.2
CDS CAA 72 bp CTTCTTTGCCAACACGAACACGGCCCTTCCACACACTaGCAGCGGCTGCAAATCCATCTCGATATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LLCQHEHGPSTH*QRLQIHLDILQ
Trigger: CTGCAGAATATCGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465765.2
CDS TCA 72 bp ATCGATGTTAACAGCCAGCGGGATCACCATCGACTCTaGCTTCTACGCTCCATGACAAAGTCACACCCCCTT +
Preference number: 6 (lower is better)
Translates to: IDVNSQRDHHRL*LLRSMTKSHPL
Trigger: AAGGGGGTGTGACTTTGTCATGGAGCGTAGAAGTCAGAGTCGATGGTGATCCCGCTGGCTGTTAACATCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483026.2
CDS GCA 72 bp TTCTTTGCCAACACGAACACGGCCCTTCCACACACTTaGAGCGGCTGCAAATCCATCTCGATATTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: FFANTNTALPHT*SGCKSISIFCS
Trigger: ACTGCAGAATATCGAGATGGATTTGCAGCCGCTGCAAGTGTGTGGAAGGGCCGTGTTCGTGTTGGCAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465765.2